Browse of TCMCG049C06627 protein

CDS

Accession Number	TCMCG049C06627
gbkey	CDS
Protein Id	XP_034893361.1
Location	join(81079..81102,82497..82570,82697..82836,82986..83072,83296..83383,83460..83540,83816..83893,83983..84062,84998..85076,85178..85507,85688..85747,91742..91982,93533..93784,94196..95554,95673..95937,96026..96158,96675..96762,96904..96982,97451..97746,98237..99302,99745..100116,100700..101304)
Gene	LOC118032707
GeneID	118032707
Organism	Populus alba

Protein

Length	1958aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA638679
db_source	XM_035037470.1
Definition	mediator of RNA polymerase II transcription subunit 13-like [Populus alba]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACTAATGTATTCAAGATTGGTGGTCTTCATCATATATCATGGTTCCAGTTTCTCCCAAATGAATCTGATTTGAACTCTTTACCTGATAAGAGTGTGAAGGTAGAGCAGAAAGATGTTGCTACATGTCTCGTGATTTTGGCTCATTTGCAGTTGCAGAAAGAGGGATTTCTAAGCACTTGGACCAATTCCTTTGTTGGACCTTGGGATCCATCACAAGGTCTACATAATCCTGATGAGAAAATAAAACTCTGGCTTTTTCTTCCTGGACGTTATTCATCTGTTGTTGATAAGGCTCAAGCTGCAGTGTCTAGATTAAGAGTTGTTGCATCTGGAATTTGGGTGGCTCCTGGGGACTCTGAAGAGGTTGCAGCAGCCCTTTCTCAATCTTTGAGGAATTACATAGAGAGAGCATTGGCCGGGTATTCATACATGCGGTTTGGAGATGTGTTTTTAAAGTACCATCCATCTCAAAGTGAAGGACTTTCCAGTAAAGGACAGCCCACAGTTGAGTTCATCTTTTCTGCCTCTGAAGAGACGATCTTTGTGCACGTGATAATATCTGCAAAGCATATCCGAGCACTTTCAAATGGTGATGTGGAAAGAGTGTTAAAACATTCTTCTACAAATTCCAGTTATAGGCTTCCAGTGATTGCTTCTCCTCATGGAATTCGTGGTTCGCTGACAGGATGTTGTCCAAGTGATCTTGTCAAGCAAGTGTATTTGAGTTCTGGCAAGTTTAGGACATTAAATGGATATATTGGCCTGCCATATCATGTTTCTCAAGGACCTGGCTGTCAGCTGAGGGGGCAAAATTGCTATGTTGAAATTACACTAGGCTGCCCAAGGTCTGATAGTGACAAGGCATTGCAAAAAAACTCGCAGTCAACTAAGAATTCATCCAAGAATTATATTGCTGAATCTATTGCAGCAAGGAGAGGTGATCAGAAGGTATCGCCAGATCACTTATCAGCTCATGAGAAAGCATTTATTTATCCTGCTGAAGCAGTTGTTGTTCCAGTCTTACAAAAATCTTTTGCTAGGTCTTCTTTGAAAAGATTTTGGCTGCAAAACTGGATAGGGCCATCACTGCCTGGTTCATCATTCTTTATGCATTGTGGTGGTGATACAGATTTTCTGGAAGGATCTTGGATTGAATCTAATGGAGTACGTATGCAGCATGGATATAACAGCAGTAGCAATAGTAATAGTAGCAGCATCAGCTCCATAAGCAGCGGCTCTAGTGACAGTGATTACAAGATGACCACTGGTGAGCTTGAGGCTGATGCTGATTCATTGTCATGCAGACAATCTGGTTTATCTTCCAATGATCAGATGGAAAATGATGGCCTCAAACTGGGTTCGAAGCGTCCTAGAACAGGGATGACTGAGCCATTTGGTCAAGCGGGCATGGTTAAAAATGTTCACATGCAAGATTTTGGTTCAGTAGAAGTTAATGATTCAGCTATTACAGGAATTGCAAATGAGCAGATTGGATCTCGTTGGGATTGGGACGATGACAGAGGTGCAGGCATGGATATCCAAGCTCTTCTCTCTGAATTTGGTGATTTTGGGGACTTCTTTGAGAATGATGATCTGCCTTTTGGAGAGCCTCCTGGAACAGCAGAGTCGCAGGCTCTTATGTTTCCTGGTCCTGATTGTGGTGAAGTTGCTAACAGTCCTATTGGGGTAATGGATGTCGTGGATCAGATGCTTCCGCCAGTAGCTTTTCCATCTTTTGAAAGTTTTAATCCGTCTCCTGCAGTAGTCATAGATGAAAGTGCCAGCAAAAGCCAAGAAGACACACCTGGTACTCTGGCATTAATTCCAGTGAACTGCACTCCATCATCTTCTTCAGGCGAGTTTGATCATTTAATCAAAGCCGAAGCTTTGATGACCTTTGCCCCAGAATATGGGGCAGTTGAAACCCTTTCAAGCGAATTCTCCTCATCAATTTTCAGGAGTCCATATTGTCCAAAATCTCGCCAAGTGGAGAGCTCAAATTCAAGTTCAAATAATTATGCATATGGTGCAACACCACCATCTTCTCCTTGCTTTGAAGGATCAAATGAGAAAACTGGCATACAGGTGAATCTGAAAACAGGTCCTGGAAGGAATGACACAAAGAAATATTACACTCTTGTGGAAGGTGGGAAAGTACCACTTGATAGAAGAACATTCACATCTAATGAAAGCCGTCCTACAAGTGAGGCGATGATGCCATCTCCATTATTGAATTCTAATTCATCAAACACTGTCAAATCTGCGCAGAGGAAAATGAGTGATGGCACACTAGGAGCAGAAAGTTTCTTATTTTCTATGAAGACTGTTCTGGCAACTGAAGTAGAATGCATTATGTTACAAGCATCCATGTGTAGAATGCGACACACGCTGTTGTCTCCTGGTAACCCTACATCTGTAAATTTGCACAGGTTAAGTGGAAGCACTGGTTTGAATCAGGTGCATGGTGATGCAAGTACCATGACAGACAACATATCTGGCAGGCATGAAGTGAAGAAAAAAGAATCTATACCAGTTAGAATAGCTGGGGATATGGATGGTGGAGTACTAGATGGGCATCTTAATTCACCTGTAGGTGTTTGGCGCTCTGTTGGAGTTCCTAAATTAACAAAACATACTAGTTCATCGAATATTGAAGTTAGTGTGTCCTTGCCACACCATTCATTCAGCGAGGAAGGGGTTCTCTCATATAGGCAAAGGCAGCAGCCACTGCAGGAGCTTTTGGATGGCATGGCATTGCTTGTCCAACAAGCTACTTCCTTTGTTGATGTGGCTCTGGATGCTGATTGTGGTGATGGTCCTTATGGGTGGCTTGCATTACAAGAACATTGGAGGCGTGGATTTTCTTGCGGGCCTTCCATGATCCATGCAGGTTGTGGAGGGACTTTGGCTTCTTGTCATTTTCTGGACATTGCTGGCGTGGAACTAGTAGACCCACTTTCTGCTGATATTCATTCTTCTGCAGTGACCACCTTGCTGCAGTCTGAAATCAAAATAGCCTTAAAATCTGCTTTCGGGAATTTGGAAGGTCCTTTATGTGTCACTGATTGGTGCAAAGGCCACATTCAGTCAGGTGATGGAGCAACCACATGCGACGGATCCTCTGGGGAGTCCACTTTAAGTGAATGCAAAGATTCAAGTACTGTAACACTGTCTGTTGGAGAACCAATGAGCCCAGCCCTCTCTTCCGCTGCTGGATCATCTTCCCTCAAAGCATCCAGTACACCAGATGGAGCTAAAGTGGATGAGACATCCCAAAGGAAATCAAATCAGGAAATAGAGCCAGAGCTTGTTCCCAGGATAAAGCCAACGGTTTTTGTTCTACCTTTGCCTGCAATTCTTGTTGGGTACCAGGACGATTGGCTTAAGACATCAGCAAGCTCTTTACAACTCTGGGAAAAGGCTCCTTTTGAACCATATGCTTCACCAAAACCAATAACTTATTGTGTTGTATGTCCAGACATTGATCCCCTTACTTCTGCAGCTGCAGATTTTTTCCAACAACTTGGAACTGTCTATGAGACGTGCAAACTGGGAACCCATTCACCTCAGAGTTTGGGAAACCAAATGGAGATGGATGCAGGGAAATCTTTGTCTTCTGGTTTTGTACTACTTGATTGCCCTCAGTCAATGAAGATAGAAAGCAGTAATGCTTCCCTTGTGGGATCGATAAGCGATTATTTTCTCTCGCTCTCCAATGGTTGGGACCTGGCAAGCTATCTTAAGTCTCTTTCGAAGGCTGTCAAGGCTTTGAAAATTGGTCCATCCTTAGCAACAAACCCAAAAGAAGGCAATAGCAGCCCTTGTATGGTTGTCTATGTGGTGTGCCCCTTTCCTGAACCTGCTGCAGTTCTACAAACTGTCATTGAATCCTCTGTTTCTATTGGGTCAATCATTCCCCCAGCAAATAGAGAGAGGAGGTCTATGTTGCTGGCTCAGGTCGGCAAAGCATTAAGCAGCTTGGCAGCTGTGGATGAAGCGTCGGCCTCAAATGTTCTAGTACTTTCTGGGTTTAGCATTCCTAAATTGGTATTGCAAATTGTGACAGTTGATGCCATTTTTAGGGTCACTAGTCCAGCTCTTAATGAGCTCATCATTCTTAAGGAGACTGCTTTCACTGTATACAATAAGGCCCGGCGAATTTCGAAAGGCTCTTCAAATGATGTTCAGCCATCAACATCAAGTAGATCTCATTTAACACAAATGAGTTCTGTTCCAGCAATGTGGAATTCGTTACCAAGAGAGACTGACATTGATTCTAGATTGAGATCTGGCACTTGGGATAACTCCTGGCAAACAGCAAGGGCTGGAGGCTTGACCTGTGATCCAAACCGAAATGGAGATTTTTCTCTTCAAGATGAGATCCGCTACATGTTTGAACCACTTTTTATTCTTTCAGAGCCCGGATCTCTGGACCATGCAGTTGCACCTACAATTATTGGTAATATGGTCTCTGAATCTTCAAAACTGCAATCTGATGATACTGGTGGAAGCTTCATGCAAAGTGCAAGCTCAGCAGGGAGTGTGGATTCTGGATCTAGCTCACAACATGATGGATCTGAGCCCGATGGCTATGGATCTAGTTATCAAAAGACTCTTCCAAGCCTGCATTGCTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTTTGCATCTGGACAGATGCAAGAGGAGAATTGCTTGACAGCCATATATTCCCTTTTGGTGGAATTAGTAGTCGCCAGGATACAAAAGGTTTGCAATGCCTTTTTGTACAAGTTTTGCAGCAAGGATGTCAGATACTTCAGGCTTGCTCCTCTCCCGACACTGGTGGTGTAAAGCCTAGAGATTTTGTGATTACTCGAATTGGAAACTTCTTTGAGCTTGAGTACATAGAGTGGCAGAAAGCCATTTATTCAGTTGGGGGTTCTGAGGTGAAGAAATGGCCACTGCAACTACGGCGATCAATGCCTGATGGGACGGCTGCAAGCGCTAATGGGGCTTCCTTGCAGCAACAGGAGATGGGTTTAATTCAAGAAAGAACCTTGCCTTCCTCACCTAGTCCGTTGTATAGCCCTCACTCAAAAGCATCTGGCTATATGAAGGGTGGTTTGGGGCAAACTTCTTCAAGAAAACAGCTTATGGGTGGGCACGCAGCAGTTGACAACTCAAGGGGGATGCTTCAGTGGATGCAGAGCATCAGTTTTGTTACAATTTCAATTGACCATTCTTTACATCTATTGCTTCAGGCTGATACACCATCTCCTGGAGGAAGTGGCAGTGGTGTTGGCACGTCAATCTATCTGGAAGGTATCACTCCTGTAAAGTCTCTCGGTTCAACATCAGCATCTTACATTTTAATTCCATCACCCAGCATGCGCTTCCTTCCATCAACACCCCTGCAGCACCCCACATGCCTCACTGCTGAATCCCCACCACTTGCACATCTCCTTCACAGTAAGGGATCTGCAATTCCGCTCTCCACTGGTTTCATGGTTTCAAAGGCTGTACCTTCTGTGAGGAGAGATTATAAGAGCAATTCAAGAGAAGAATGGCCTTCTGTTCTTTCTGTGAGTCTCATTGATTATTATGGAGGCAATAATATGACCCAAGATAAAATGTTTCGAAGGATTGTGAAGCAAGGGGGACGGACTTTAGGTGTAGATGGTAAAGATTTTGAAATCAGGACCCAGGTAATTCTTGAGAGTGTCGCAGCAGAACTTCAAGCCCTATCATGGATGACTGTGAGCCCAGCATATTTGGAGCGAAGAACCGCACTTCCATTTCATTGTGACATGGTTTTAAGACTCAGAAGACTGCTTCATTTTGCTGATAAAGAGCTCTCTTCACAGCCGGGTCGGTCACAGGTATAA

Protein:   MWTNVFKIGGLHHISWFQFLPNESDLNSLPDKSVKVEQKDVATCLVILAHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRYSSVVDKAQAAVSRLRVVASGIWVAPGDSEEVAAALSQSLRNYIERALAGYSYMRFGDVFLKYHPSQSEGLSSKGQPTVEFIFSASEETIFVHVIISAKHIRALSNGDVERVLKHSSTNSSYRLPVIASPHGIRGSLTGCCPSDLVKQVYLSSGKFRTLNGYIGLPYHVSQGPGCQLRGQNCYVEITLGCPRSDSDKALQKNSQSTKNSSKNYIAESIAARRGDQKVSPDHLSAHEKAFIYPAEAVVVPVLQKSFARSSLKRFWLQNWIGPSLPGSSFFMHCGGDTDFLEGSWIESNGVRMQHGYNSSSNSNSSSISSISSGSSDSDYKMTTGELEADADSLSCRQSGLSSNDQMENDGLKLGSKRPRTGMTEPFGQAGMVKNVHMQDFGSVEVNDSAITGIANEQIGSRWDWDDDRGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFPGPDCGEVANSPIGVMDVVDQMLPPVAFPSFESFNPSPAVVIDESASKSQEDTPGTLALIPVNCTPSSSSGEFDHLIKAEALMTFAPEYGAVETLSSEFSSSIFRSPYCPKSRQVESSNSSSNNYAYGATPPSSPCFEGSNEKTGIQVNLKTGPGRNDTKKYYTLVEGGKVPLDRRTFTSNESRPTSEAMMPSPLLNSNSSNTVKSAQRKMSDGTLGAESFLFSMKTVLATEVECIMLQASMCRMRHTLLSPGNPTSVNLHRLSGSTGLNQVHGDASTMTDNISGRHEVKKKESIPVRIAGDMDGGVLDGHLNSPVGVWRSVGVPKLTKHTSSSNIEVSVSLPHHSFSEEGVLSYRQRQQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMIHAGCGGTLASCHFLDIAGVELVDPLSADIHSSAVTTLLQSEIKIALKSAFGNLEGPLCVTDWCKGHIQSGDGATTCDGSSGESTLSECKDSSTVTLSVGEPMSPALSSAAGSSSLKASSTPDGAKVDETSQRKSNQEIEPELVPRIKPTVFVLPLPAILVGYQDDWLKTSASSLQLWEKAPFEPYASPKPITYCVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQSLGNQMEMDAGKSLSSGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLASYLKSLSKAVKALKIGPSLATNPKEGNSSPCMVVYVVCPFPEPAAVLQTVIESSVSIGSIIPPANRERRSMLLAQVGKALSSLAAVDEASASNVLVLSGFSIPKLVLQIVTVDAIFRVTSPALNELIILKETAFTVYNKARRISKGSSNDVQPSTSSRSHLTQMSSVPAMWNSLPRETDIDSRLRSGTWDNSWQTARAGGLTCDPNRNGDFSLQDEIRYMFEPLFILSEPGSLDHAVAPTIIGNMVSESSKLQSDDTGGSFMQSASSAGSVDSGSSSQHDGSEPDGYGSSYQKTLPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQACSSPDTGGVKPRDFVITRIGNFFELEYIEWQKAIYSVGGSEVKKWPLQLRRSMPDGTAASANGASLQQQEMGLIQERTLPSSPSPLYSPHSKASGYMKGGLGQTSSRKQLMGGHAAVDNSRGMLQWMQSISFVTISIDHSLHLLLQADTPSPGGSGSGVGTSIYLEGITPVKSLGSTSASYILIPSPSMRFLPSTPLQHPTCLTAESPPLAHLLHSKGSAIPLSTGFMVSKAVPSVRRDYKSNSREEWPSVLSVSLIDYYGGNNMTQDKMFRRIVKQGGRTLGVDGKDFEIRTQVILESVAAELQALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSSQPGRSQV